/cemt/K005713_0_lane_gembs

BACK

SAMPLE K005713_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1094460902 100.00 % 547230451 100.00 % 547230451 100.00 %
General Reads 1062150651 97.05 % 532774766 97.36 % 529375885 96.74 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2374807 0.22 % 1186258 0.22 % 1188549 0.22 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 29935444 2.74 % 13269427 2.42 % 16666017 3.05 %
Bisulfite_reads C2T 539049336 49.25 % 270295064 49.39 % 268754272 49.11 %
Bisulfite_reads G2A 525476122 48.01 % 263665960 48.18 % 261810162 47.84 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 370357459
Average Unique 67.68 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 63951601005 38.70 % 27427340468 33.19 % 36524260537 44.20 %
Base Counts Overall C 17766406315 10.75 % 1045182847 1.26 % 16721223468 20.24 %
Base Counts Overall G 17888144643 10.82 % 16590663556 20.08 % 1297481087 1.57 %
Base Counts Overall T 64551090264 39.06 % 37016682406 44.80 % 27534407858 33.32 %
Base Counts Overall N 1106353975 0.67 % 551928824 0.67 % 554425151 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9874992081697654
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 414989438



Mapping Quality

Mapping Quality Histogram
K005713_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005713_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF852JXE_150bp_chastity