/EXTERNAL Roadmap/K012802_1_lane_gembs/EXTERNAL-K012802_1969445
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 327443560 | 100.00 % | 163721780 | 100.00 % | 163721780 | 100.00 % |
| General Reads | 309186031 | 94.42 % | 154680242 | 94.48 % | 154505789 | 94.37 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 789883 | 0.24 % | 395346 | 0.24 % | 394537 | 0.24 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17467646 | 5.33 % | 8646192 | 5.28 % | 8821454 | 5.39 % |
| Bisulfite_reads C2T | 157193393 | 48.01 % | 78631564 | 48.03 % | 78561829 | 47.98 % |
| Bisulfite_reads G2A | 152782521 | 46.66 % | 76444024 | 46.69 % | 76338497 | 46.63 % |
| Concept | Value |
|---|---|
| Unique Fragments | 88348654 |
| Average Unique | 53.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 12799629688 | 38.70 % | 4977055968 | 30.10 % | 7822573720 | 47.31 % |
| Base Counts Overall C | 3498574418 | 10.58 % | 275915854 | 1.67 % | 3222658564 | 19.49 % |
| Base Counts Overall G | 3869375271 | 11.70 % | 3436977515 | 20.78 % | 432397756 | 2.61 % |
| Base Counts Overall T | 12506376380 | 37.82 % | 7648109689 | 46.25 % | 4858266691 | 29.38 % |
| Base Counts Overall N | 397843803 | 1.20 % | 197840754 | 1.20 % | 200003049 | 1.21 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9797010656499301 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 107471749 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 163721780 |
| 100 | 163721780 |
| Insert Size Histogram |
|---|
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