/EXTERNAL Roadmap/K012800_1_lane_gembs/EXTERNAL-K012800_1969443
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1141159424 | 100.00 % | 570579712 | 100.00 % | 570579712 | 100.00 % |
| General Reads | 1078770775 | 94.53 % | 541395128 | 94.89 % | 537375647 | 94.18 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5393442 | 0.47 % | 2704609 | 0.47 % | 2688833 | 0.47 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 56995207 | 4.99 % | 26479975 | 4.64 % | 30515232 | 5.35 % |
| Bisulfite_reads C2T | 551302632 | 48.31 % | 276625869 | 48.48 % | 274676763 | 48.14 % |
| Bisulfite_reads G2A | 532861585 | 46.69 % | 267473868 | 46.88 % | 265387717 | 46.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 366424241 |
| Average Unique | 64.22 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 44803096065 | 38.87 % | 18451635798 | 32.02 % | 26351460267 | 45.73 % |
| Base Counts Overall C | 11650095258 | 10.11 % | 639759670 | 1.11 % | 11010335588 | 19.11 % |
| Base Counts Overall G | 12427555305 | 10.78 % | 11457934502 | 19.88 % | 969620803 | 1.68 % |
| Base Counts Overall T | 44900724273 | 38.96 % | 26312593722 | 45.66 % | 18588130551 | 32.26 % |
| Base Counts Overall N | 1475630923 | 1.28 % | 766627220 | 1.33 % | 709003703 | 1.23 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9866402316029692 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 428916194 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 570579712 |
| 100 | 570579712 |
| Insert Size Histogram |
|---|
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