/EXTERNAL Roadmap/K012812_1_lane_gembs/EXTERNAL-K012812_1969455
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1486716426 | 100.00 % | 743358213 | 100.00 % | 743358213 | 100.00 % |
| General Reads | 1386587016 | 93.27 % | 694793453 | 93.47 % | 691793563 | 93.06 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10237958 | 0.69 % | 5121175 | 0.69 % | 5116783 | 0.69 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 89891452 | 6.05 % | 43443585 | 5.84 % | 46447867 | 6.25 % |
| Bisulfite_reads C2T | 708131259 | 47.63 % | 354782155 | 47.73 % | 353349104 | 47.53 % |
| Bisulfite_reads G2A | 688693715 | 46.32 % | 345132473 | 46.43 % | 343561242 | 46.22 % |
| Concept | Value |
|---|---|
| Unique Fragments | 377990691 |
| Average Unique | 50.85 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 57275963626 | 38.14 % | 22498677335 | 29.97 % | 34777286291 | 46.32 % |
| Base Counts Overall C | 16311541802 | 10.86 % | 1474397669 | 1.96 % | 14837144133 | 19.76 % |
| Base Counts Overall G | 17843403720 | 11.88 % | 15681796069 | 20.89 % | 2161607651 | 2.88 % |
| Base Counts Overall T | 55955419632 | 37.26 % | 33940277151 | 45.21 % | 22015142481 | 29.32 % |
| Base Counts Overall N | 2772030246 | 1.85 % | 1484031289 | 1.98 % | 1287998957 | 1.72 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9849897050320456 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 472162656 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 743358213 |
| 100 | 743358213 |
| Insert Size Histogram |
|---|
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