/EXTERNAL Roadmap/K012804_1_lane_gembs/EXTERNAL-K012804_1969447
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1871145386 | 100.00 % | 935572693 | 100.00 % | 935572693 | 100.00 % |
| General Reads | 1744048248 | 93.21 % | 877295898 | 93.77 % | 866752350 | 92.64 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7187535 | 0.38 % | 3616273 | 0.39 % | 3571262 | 0.38 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 119909603 | 6.41 % | 54660522 | 5.84 % | 65249081 | 6.97 % |
| Bisulfite_reads C2T | 889594724 | 47.54 % | 447448969 | 47.83 % | 442145755 | 47.26 % |
| Bisulfite_reads G2A | 861641059 | 46.05 % | 433463202 | 46.33 % | 428177857 | 45.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 483880149 |
| Average Unique | 51.72 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 72420283819 | 38.32 % | 28192651384 | 29.84 % | 44227632435 | 46.81 % |
| Base Counts Overall C | 19937732112 | 10.55 % | 1498864232 | 1.59 % | 18438867880 | 19.51 % |
| Base Counts Overall G | 22157884912 | 11.72 % | 19706991161 | 20.86 % | 2450893751 | 2.59 % |
| Base Counts Overall T | 71265369729 | 37.71 % | 43463445925 | 46.00 % | 27801923804 | 29.42 % |
| Base Counts Overall N | 3204413414 | 1.70 % | 1630889291 | 1.73 % | 1573524123 | 1.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9838402226073477 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 592923049 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 935572693 |
| 100 | 935572693 |
| Insert Size Histogram |
|---|
 |