/EXTERNAL Roadmap/K012808_1_lane_gembs/EXTERNAL-K012808_1969451
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1817752526 | 100.00 % | 908876263 | 100.00 % | 908876263 | 100.00 % |
| General Reads | 1704793538 | 93.79 % | 847161500 | 93.21 % | 857632038 | 94.36 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4346049 | 0.24 % | 2156217 | 0.24 % | 2189832 | 0.24 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 108612939 | 5.98 % | 59558546 | 6.55 % | 49054393 | 5.40 % |
| Bisulfite_reads C2T | 872541272 | 48.00 % | 433650744 | 47.71 % | 438890528 | 48.29 % |
| Bisulfite_reads G2A | 836598315 | 46.02 % | 415666973 | 45.73 % | 420931342 | 46.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 519652132 |
| Average Unique | 57.18 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 69885856582 | 38.07 % | 26834782690 | 29.23 % | 43051073892 | 46.90 % |
| Base Counts Overall C | 20678666354 | 11.26 % | 2216917631 | 2.42 % | 18461748723 | 20.11 % |
| Base Counts Overall G | 22302442614 | 12.15 % | 19547435240 | 21.29 % | 2755007374 | 3.00 % |
| Base Counts Overall T | 68062591170 | 37.07 % | 41900365993 | 45.64 % | 26162225177 | 28.50 % |
| Base Counts Overall N | 2663448406 | 1.45 % | 1297001009 | 1.41 % | 1366447397 | 1.49 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.985917448488492 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 622734459 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 908876263 |
| 100 | 908876263 |
| Insert Size Histogram |
|---|
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