This folder contains summary of 645 WGBS samples
BigWig files for every EpiRR WGBS/PBAT:
x-coverage
./cov 
and in methylation folder for 3 different coverage thresholds( >=3, >=5, >=10):
./meth3
./meth5
./meth10

GemBS output (*cpg.bed file) that reports methylation values for C on (+) and (-) strands (in the CpG context) was 
psotprocessed:
1.CpG coverage was calculated as a sum of GemBS reported coverage of C and G (when available for both strands) 
and used as is, if reported for just one strand.
2. The methylation for the CpG is calculated as average for both strands weighted by the coverage. 

18/08/2026
Misha Bilenky
mbilenky@bcgsc.ca